rdf-syntax-grammar
mods:
  schema location: http://www.loc.gov/mods/v3 http://www.loc.gov/standards/mods/v3/mods-3-2.xsd
  title info:
    title: High-Performance Computational Solutions in Protein Bioinformatics
  name:
    name part: Mrozek, Dariusz.
    role:
      role term: creator
    role:
      role term: author.
  name:
    name part: SpringerLink (Online service)
  type of resource: text
  origin info:
    place:
      place term: gw
    date issued: 2014
    issuance: monographic
  language:
    language term: eng
  physical description:
    form: electronic
    form: electronic resource
    reformatting quality: access
    form: remote
    extent: XIX, 109 p. 56 illus., 21 illus. in color. online resource.
  abstract: Recent developments in computer science enable algorithms previously perceived as too time-consuming to now be efficiently used for applications in bioinformatics and life sciences. This work focuses on proteins and their structures, protein structure similarity searching at main representation levels, and various techniques that can be used to accelerate similarity searches. Divided into four parts, the first part provides a formal model of 3D protein structures for functional genomics, comparative bioinformatics, and molecular modeling. The second part focuses on the use of multithreading for efficient approximate searching on protein secondary structures. The third and fourth parts concentrate on finding 3D protein structure similarities with the support of GPUs and cloud computing. Parts three and four both describe the acceleration of different methods. The text will be of interest to researchers and software developers working in the field of structural bioinformatics and biomedical databases.
  table of contents: Formal Model of 3D Protein Structures for Functional Genomics, Comparative Bioinformatics, and Molecular Modeling -- Multithreaded PSS-SQL for Searching Databases of Secondary Structures -- GPU and CUDA for 3D Protein Structure Similarity Searching -- Cloud Computing for 3D Protein Structure Alignment -- General Discussion and Concluding Remarks.
  note: by Dariusz Mrozek.
  subject:
    topic: Computer science
  subject:
    topic: Microprocessors
  subject:
    topic: Computer communication systems
  subject:
    topic: Bioinformatics
  subject:
    topic: Proteins
  subject:
    topic: Biomathematics
  subject:
    topic: Computer Science
  subject:
    topic: Computational Biology/Bioinformatics
  subject:
    topic: Computer Communication Networks
  subject:
    topic: Protein Structure
  subject:
    topic: Bioinformatics
  subject:
    topic: Processor Architectures
  subject:
    topic: Mathematical and Computational Biology
  classification: QH324.2-324.25
  classification: 570.285
  related item:
    title info:
      title: Springer eBooks
  related item:
    title info:
      title: SpringerBriefs in Computer Science
  identifier: 9783319069715
  identifier: http://dx.doi.org/10.1007/978-3-319-06971-5
  record info:
    record creation date: 140604
    record change date: 20151103123053.0
    record identifier: 978-3-319-06971-5