Java for Bioinformatics and Biomedical Applications

Java for Bioinformatics and Biomedical Applications describes the work of the U.S. National Cancer Institute (NCI, National Institutes of Health, U.S. Department of Health and Human Services) and a large number of cancer centers across the U.S. under the caBIG™ (cancer Biomedical Informatics Grid) p...

Πλήρης περιγραφή

Λεπτομέρειες βιβλιογραφικής εγγραφής
Κύριοι συγγραφείς: Bal, Harshawardhan (Συγγραφέας), Hujol, Johnny (Συγγραφέας)
Συγγραφή απο Οργανισμό/Αρχή: SpringerLink (Online service)
Μορφή: Ηλεκτρονική πηγή Ηλ. βιβλίο
Γλώσσα:English
Έκδοση: Boston, MA : Springer US, 2007.
Θέματα:
Διαθέσιμο Online:Full Text via HEAL-Link
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100 1 |a Bal, Harshawardhan.  |e author. 
245 1 0 |a Java for Bioinformatics and Biomedical Applications  |h [electronic resource] /  |c by Harshawardhan Bal, Johnny Hujol. 
264 1 |a Boston, MA :  |b Springer US,  |c 2007. 
300 |a XVIII, 342 p. 108 illus., 16 illus. in color.  |b online resource. 
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505 0 |a to Bioinformatics and Java -- to Basic Local Alignment Search Tool -- Running BLAST using SwingBlast -- Facilitating PubMed Searches: JavaServer Pages and Java Servlets -- Creating a Gene Prediction and BLAST Analysis Pipeline -- cancer Biomedical Informatics Grid (caBIG™). 
520 |a Java for Bioinformatics and Biomedical Applications describes the work of the U.S. National Cancer Institute (NCI, National Institutes of Health, U.S. Department of Health and Human Services) and a large number of cancer centers across the U.S. under the caBIG™ (cancer Biomedical Informatics Grid) program, as well as standard bioinformatics applications. The goal of NCI caBIG™ is to create a standards based, interoperable network of individuals, applications and data to enhance the pace of cancer research. CaBIG™ uses J2EE and open source standards for all software development work. This book examines the tools and technologies being developed under caBIG™ to meet the goal of eliminating suffering and death from cancer by 2015 as formulated by the former NCI Director, Dr. Andrew von Eschenbach.In doing so, it provides a vignette into the efforts of thousands of people – molecular biologists, medical practitioners, software developers, to name a few - across the country to bring the promise of translational research to individuals with cancer. From a software perspective, a functional approach is used to teach the Java platform and its features for enterprise-level application development. Under this approach, the various syntactical and operative elements of the language and any software libraries that have been used (for example, BioJava, Apache, etc.) are taught not in isolation but in the context of discrete definable research problems that enable the user to relate how the different parts of the language fit together in the big picture. All examples are derived from practical problems faced in biomedical/clinical data retrieval and analysis during routine bioinformatics and cancer research. Further, the book illustrates how individual bioinformatics applications (such as BLAST and Genscan) can be stitched together into a pipeline so that users can direct the output of one tool (for example, gene predictions using Genscan) to perform further analysis (say, homology searching using BLAST). 
650 0 |a Life sciences. 
650 0 |a Cancer research. 
650 0 |a Computer programming. 
650 0 |a Proteomics. 
650 0 |a Bioinformatics. 
650 0 |a Computational biology. 
650 1 4 |a Life Sciences. 
650 2 4 |a Bioinformatics. 
650 2 4 |a Biomedicine general. 
650 2 4 |a Programming Techniques. 
650 2 4 |a Computer Appl. in Life Sciences. 
650 2 4 |a Cancer Research. 
650 2 4 |a Proteomics. 
700 1 |a Hujol, Johnny.  |e author. 
710 2 |a SpringerLink (Online service) 
773 0 |t Springer eBooks 
776 0 8 |i Printed edition:  |z 9780387372358 
856 4 0 |u http://dx.doi.org/10.1007/978-0-387-37237-2  |z Full Text via HEAL-Link 
912 |a ZDB-2-SBL 
950 |a Biomedical and Life Sciences (Springer-11642)