Systems Biology and Computational Proteomics Joint RECOMB 2006 Satellite Workshops on Systems Biology and on Computational Proteomics, San Diego, CA, USA, December 1-3, 2006, Revised Selected Papers /

• Corporate Author: SpringerLink (Online service)
• Other Authors: Ideker, Trey (Editor), Bafna, Vineet (Editor)
• Format: Electronic eBook
• Language: English
• Published: Berlin, Heidelberg : Springer Berlin Heidelberg, 2007.
• Series: Lecture Notes in Computer Science, 4532
• Subjects: Life sciences.; Data structures (Computer science).; Algorithms.; Computer science > Mathematics.; Database management.; Bioinformatics.; Life Sciences.; Life Sciences, general.; Algorithm Analysis and Problem Complexity.; Discrete Mathematics in Computer Science.; Data Structures.; Database Management.; Computational Biology/Bioinformatics.

Table of Contents:

• Not All Scale Free Networks Are Born Equal: The Role of the Seed Graph in PPI Network Emulation
• Probabilistic Paths for Protein Complex Inference
• Markov Additive Chains and Applications to Fragment Statistics for Peptide Mass Fingerprinting
• A Context-Specific Network of Protein-DNA and Protein-Protein Interactions Reveals New Regulatory Motifs in Human B Cells
• Identification and Evaluation of Functional Modules in Gene Co-expression Networks
• A Linear Discrete Dynamic System Model for Temporal Gene Interaction and Regulatory Network Influence in Response to Bioethanol Conversion Inhibitor HMF for Ethanologenic Yeast
• A Computational Approach for the Identification of Site-Specific Protein Glycosylations Through Ion-Trap Mass Spectrometry
• De Novo Signaling Pathway Predictions Based on Protein-Protein Interaction, Targeted Therapy and Protein Microarray Analysis
• Alignment of Mass Spectrometry Data by Clique Finding and Optimization.