Marine Metagenomics Technological Aspects and Applications /

• Συγγραφή απο Οργανισμό/Αρχή: SpringerLink (Online service)
• Άλλοι συγγραφείς: Gojobori, Takashi (Επιμελητής έκδοσης, http://id.loc.gov/vocabulary/relators/edt), Wada, Tokio (Επιμελητής έκδοσης, http://id.loc.gov/vocabulary/relators/edt), Kobayashi, Takanori (Επιμελητής έκδοσης, http://id.loc.gov/vocabulary/relators/edt), Mineta, Katsuhiko (Επιμελητής έκδοσης, http://id.loc.gov/vocabulary/relators/edt)
• Μορφή: Ηλεκτρονική πηγή Ηλ. βιβλίο
• Γλώσσα: English
• Έκδοση: Singapore : Springer Singapore : Imprint: Springer, 2019.
• Έκδοση: 1st ed. 2019.
• Θέματα: Bioinformatics.; Marine sciences.; Freshwater.; Genetics.; Bioinformatics .; Computational biology .; Aquatic ecology .; Virology.; Marine & Freshwater Sciences.; Genetics and Genomics.; Computer Appl. in Life Sciences.; Freshwater & Marine Ecology.

This book presents the state-of-art marine metagenome research and explains the method of marine metagenomic analysis in an easy-to-understand manner. Changes in the marine environment due to global warming and pollution have become a major global problem. Maintaining a healthy marine ecosystem requ...

Πίνακας περιεχομένων:

• Part 1: Technological Aspects of Marine Metagenomics: Sample Collection and preparation methods
• Chapter 1: Metagenomic methods: from seawater to the database
• Chapter 2: Collection of microbial DNA from marine sediments
• Chapter 3: Primer design, evaluation of primer universality and estimation of identification power of amplicon sequences in silico
• Chapter 4: High coverage expression profiling (HiCEP) of microbial community genomes in the ocean
• Part 2: Technological Aspects of Marine Metagenomics: Metagenome Data Analysis
• Chapter 5: Introduction and application of Digital DNA Chip Analysis (DDCA) to metagenomic analysis
• Chapter 6: Horizontal gene transfer in marine environment: a technical perspective on metagenomics
• Chapter 7: MAPLE enables functional assessment of microbiota in various environments
• Part 3: Applications in Ocean and Fisheries Sciences: Diversity and Function of Microbial Community
• Chapter 8: Comparison of microscopic and PCR amplicon and shotgun metagenomic approaches applied to marine diatom communities
• Chapter 9: Seasonal dynamics of bacterial community composition in coastal seawater at Sendai Bay, Japan
• Chapter 10: Shotgun metagenome analyses: seasonality monitoring in Sendai Bay and search for red tide marker sequences
• Chapter 11: Distribution and community composition of ammonia-oxidizing archaea and bacteria in coastal sediments in response to sediment material gradients at Sendai Bay, Japan
• Chapter 12: Marine metagenomic sequence counts of reads assigned to taxa consistently proportionate to read counts obtained for per g of sea water sample
• Chapter 13: New aquaculture technology based on host-symbiotic co-metabolism
• Part 4: Applications in Ocean and Fisheries Sciences: Analysis of the Red Tide
• Chapter 14: Influences of diurnal sampling bias on fixed-point monitoring of plankton biodiversity determined using a massively parallel sequencing-based technique
• Chapter 15: Detection of microorganisms which show positive or negative correlations with red tide causing alga using a new time-series network model.