Laser speckle imaging : spatio-temporal image enhancement

It is well known now that there exists a coupling between functional brain activity and regional blood flow response in the somatosensory cortex and other cortical areas. Various modalities, including functional magnetic resonance imaging and optical imaging (intrinsic signals as well as fluorescenc...

Full description

Bibliographic Details
Main Author: Fontenelle, Hugues
Other Authors: Μπεζεριάνος, Αναστάσιος
Format: Thesis
Language:English
Published: 2010
Subjects:
Online Access:http://nemertes.lis.upatras.gr/jspui/handle/10889/3378
id nemertes-10889-3378
record_format dspace
spelling nemertes-10889-33782022-09-05T20:21:56Z Laser speckle imaging : spatio-temporal image enhancement Απεικόνιση κοκκίδωσης λέιζερ : χωρο-χρονική βελτίωση εικόνας Fontenelle, Hugues Μπεζεριάνος, Αναστάσιος Παναγιωτάκης, Γεώργιος Παλληκαράκης, Νικόλαος Κωστόπουλος, Γεώργιος Μητσάκου, Aδαμαντία Νικηφορίδης, Γεώργιος Φωτόπουλος, Σπύρος Μπεζεριάνος, Αναστάσιος Laser speckle imaging (LSI) Cerebral blood flow Απεικόνιση κοκκίδωσης λέιζερ Ροή αίματος στον εγκεφαλικό φλοίο 610.28 It is well known now that there exists a coupling between functional brain activity and regional blood flow response in the somatosensory cortex and other cortical areas. Various modalities, including functional magnetic resonance imaging and optical imaging (intrinsic signals as well as fluorescence), have been developed in the past to map functional brain activity. The complexity and fundamental physical constraints of the instruments preclude functional imaging in awake, behaving small animals. This thesis presents the method of Laser Speckle Imaging (LSI) of brain with high spatial and temporal resolution, and potential for imaging awake and behaving animals. The method has the potential to map brain activation with high sensitivity and spatiotemporal resolution without using any exogenous contrast agents. In LSI, scattered laser light with different paths produces a random interference pattern known as speckle, fluctuations of which contain information about the motion of particles in the underlying medium. A post-processing step is needed to extract information out of the speckle images, two of which we introduce in details. Our first method is based on Laser speckle contrast analysis (LASCA), which has been demonstrated as a full-field method for imaging the cerebral blood flow (CBF). However, conventional LASCA is limited to extremely low dynamic range because of the ambient background field, dark current and anomalies in the circuits of CCD camera, which makes it difficult to analyze the spatiotemporal variabilities in CBF. In this study, we propose an enhanced laser speckle contrast analysis (eLASCA) method to improve the dynamic range of LASCA based on monotonic point transformation (MPT). In addition, eLASCA greatly improves the CBF visualization, which is very helpful in demonstrating the details of CBF change. Our second method involves the second order features (SOFs) of the image; they are derived from the cooccurrence matrix that in turn was calculated over the same spatial and temporal window than for the contrast. The image quality metrics - equivalent number of looks, entropy and objective quality – showed superior performance of the SOFs comparing to the contrast analysis. -- 2010-07-19T10:24:28Z 2010-07-19T10:24:28Z 2010-12-20 2010-07-19T10:24:28Z Thesis http://nemertes.lis.upatras.gr/jspui/handle/10889/3378 en Η ΒΥΠ διαθέτει αντίτυπο της διατριβής σε έντυπη μορφή στο βιβλιοστάσιο διδακτορικών διατριβών που βρίσκεται στο ισόγειο του κτιρίου της. 0 application/pdf
institution UPatras
collection Nemertes
language English
topic Laser speckle imaging (LSI)
Cerebral blood flow
Απεικόνιση κοκκίδωσης λέιζερ
Ροή αίματος στον εγκεφαλικό φλοίο
610.28
spellingShingle Laser speckle imaging (LSI)
Cerebral blood flow
Απεικόνιση κοκκίδωσης λέιζερ
Ροή αίματος στον εγκεφαλικό φλοίο
610.28
Fontenelle, Hugues
Laser speckle imaging : spatio-temporal image enhancement
description It is well known now that there exists a coupling between functional brain activity and regional blood flow response in the somatosensory cortex and other cortical areas. Various modalities, including functional magnetic resonance imaging and optical imaging (intrinsic signals as well as fluorescence), have been developed in the past to map functional brain activity. The complexity and fundamental physical constraints of the instruments preclude functional imaging in awake, behaving small animals. This thesis presents the method of Laser Speckle Imaging (LSI) of brain with high spatial and temporal resolution, and potential for imaging awake and behaving animals. The method has the potential to map brain activation with high sensitivity and spatiotemporal resolution without using any exogenous contrast agents. In LSI, scattered laser light with different paths produces a random interference pattern known as speckle, fluctuations of which contain information about the motion of particles in the underlying medium. A post-processing step is needed to extract information out of the speckle images, two of which we introduce in details. Our first method is based on Laser speckle contrast analysis (LASCA), which has been demonstrated as a full-field method for imaging the cerebral blood flow (CBF). However, conventional LASCA is limited to extremely low dynamic range because of the ambient background field, dark current and anomalies in the circuits of CCD camera, which makes it difficult to analyze the spatiotemporal variabilities in CBF. In this study, we propose an enhanced laser speckle contrast analysis (eLASCA) method to improve the dynamic range of LASCA based on monotonic point transformation (MPT). In addition, eLASCA greatly improves the CBF visualization, which is very helpful in demonstrating the details of CBF change. Our second method involves the second order features (SOFs) of the image; they are derived from the cooccurrence matrix that in turn was calculated over the same spatial and temporal window than for the contrast. The image quality metrics - equivalent number of looks, entropy and objective quality – showed superior performance of the SOFs comparing to the contrast analysis.
author2 Μπεζεριάνος, Αναστάσιος
author_facet Μπεζεριάνος, Αναστάσιος
Fontenelle, Hugues
format Thesis
author Fontenelle, Hugues
author_sort Fontenelle, Hugues
title Laser speckle imaging : spatio-temporal image enhancement
title_short Laser speckle imaging : spatio-temporal image enhancement
title_full Laser speckle imaging : spatio-temporal image enhancement
title_fullStr Laser speckle imaging : spatio-temporal image enhancement
title_full_unstemmed Laser speckle imaging : spatio-temporal image enhancement
title_sort laser speckle imaging : spatio-temporal image enhancement
publishDate 2010
url http://nemertes.lis.upatras.gr/jspui/handle/10889/3378
work_keys_str_mv AT fontenellehugues laserspeckleimagingspatiotemporalimageenhancement
AT fontenellehugues apeikonisēkokkidōsēsleizerchōrochronikēbeltiōsēeikonas
_version_ 1771297336907005952