Structural and mechanistic enzymology /

"Structural and Mechanistic Enzymology, Volume 109, the latest release in the Advances in Protein Chemistry and Structural Biology series, is an essential resource for protein chemists. Its volumes bring forth new information about protocols and analysis of proteins, with each thematically orga...

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Άλλοι συγγραφείς: Karabencheva-Christova, Tatyana (Επιμελητής έκδοσης)
Μορφή: Ηλ. βιβλίο
Γλώσσα:English
Έκδοση: Cambridge, MA : Academic Press is an imprint of Elsevier, 2017.
Έκδοση:First edition.
Σειρά:Advances in protein chemistry and structural biology ; v. 109.
Θέματα:
Διαθέσιμο Online:Full Text via HEAL-Link
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245 0 0 |a Structural and mechanistic enzymology /  |c edited by Tatyana Karabencheva-Christova 
250 |a First edition. 
264 1 |a Cambridge, MA :  |b Academic Press is an imprint of Elsevier,  |c 2017. 
300 |a 1 online resource. 
336 |a text  |b txt  |2 rdacontent 
337 |a computer  |b c  |2 rdamedia 
338 |a online resource  |b cr  |2 rdacarrier 
490 1 |a Advances in protein chemistry and structural biology ;  |v volume 109 
588 0 |a Online resource; title from PDF title page (ScienceDirect, viewed July 13, 2017). 
504 |a Includes bibliographical references. 
520 |a "Structural and Mechanistic Enzymology, Volume 109, the latest release in the Advances in Protein Chemistry and Structural Biology series, is an essential resource for protein chemists. Its volumes bring forth new information about protocols and analysis of proteins, with each thematically organized volume guest edited by leading experts in a broad range of protein-related topics. This volume presents state-of-the-art contributions, providing insights into the relationship between enzyme structure, catalysis, and function. The understanding of enzymatic molecular mechanisms requires a combined application of a broad range of experimental and computational techniques. Experimental methods such as NMR spectroscopy, X-ray crystallography, molecular biology, and kinetic studies, combined with a range of molecular modeling techniques such as molecular dynamics, quantum chemistry, and docking, provide us a synergistic approach for gaining insights into enzyme catalysis, structure, and function.Provides cutting-edge developments in protein chemistry and structural biologyFeatures new information about protocols and analysis of proteinsContains chapters written by authorities in their respective fieldsTargeted to a wide audience of researchers, specialists and students"--  |c Provided by publisher. 
505 0 |a Title page; Table of Contents; Copyright; Contributors; Preface; Chapter One: Collagenolytic Matrix Metalloproteinase Structure-Function Relationships: Insights From Molecular Dynamics Studies; Abstract; 1 Matrix Metalloproteinases; 2 MD Simulation Approaches; 3 MD Simulation of the Collagen Triple Helix; 4 MD Simulation of the MMP Cleavage Site in Collagen; 5 MD Consideration of Water Surrounding Collagen; 6 MD of MMP-1 or MMP-8 Interaction With Collagen; 7 MD of MMP-2 Interaction With Collagen; 8 Mechanism of Collagenolysis; Acknowledgments 
505 8 |a Chapter Two: Computational Glycobiology: Mechanistic Studies of Carbohydrate-Active Enzymes and Implication for Inhibitor DesignAbstract; 1 Introduction; 2 Computational Methods; 3 Puckering of Carbohydrate Structures; 4 Identification of Catalytically Competent Protonation States of Key Residues; 5 Clarification of Catalytic Mechanisms; 6 Transition-State Analogues as Inhibitors of CAZymes; 7 Conclusions and Future Directions; Acknowledgments; Chapter Three: Computational Biochemistry-Enzyme Mechanisms Explored; Abstract; 1 Introduction; 2 Structural Models 
505 8 |a 3 Calculating Enzymatic Mechanisms4 Going Beyond the Exploration of the Reaction Paths; Chapter Four: A Paradigm for C-H Bond Cleavage: Structural and Functional Aspects of Transition State Stabilization by Mandelate Racemase; Abstract; 1 Introduction; 2 Structure and Function Within the MR Subgroup; 3 MR Catalysis: An Uphill Battle; 4 Meeting the Challenges: Solutions Afforded by MR; 5 Mandelate Racemase Structure: Ligand Binding Within a Catalytic Cage; 6 Evolutionary Relationships: A Mechanistic Link to Aldolases?; 7 Concluding Remarks; Acknowledgments 
505 8 |a Chapter Five: Striking Diversity in Holoenzyme Architecture and Extensive Conformational Variability in Biotin-Dependent CarboxylasesAbstract; 1 Introduction; 2 Structures of Conserved Components in Biotin-Dependent Carboxylases; 3 Extensive Diversity in Holoenzyme Architectures; 4 Extensive Conformational Variability; 5 Perspectives; Acknowledgments; Chapter Six: Enzymology of Microbial Dimethylsulfoniopropionate Catabolism; Abstract; 1 Introduction; 2 DMSP Demethylation Pathway and the Demethylase, DmdA; 3 DMSP Cleavage Enzymes 
505 8 |a 4 The CoA-Transferase Pathway of DMS and 3-Hydroxypropionate Formation Using DddD5 The Lyase Pathway of DMS and Acrylate Generation; 6 Summary and Perspective; Acknowledgments; Chapter Seven: Sortase Transpeptidases: Structural Biology and Catalytic Mechanism; Abstract; 1 Introduction; 2 Structural Biology: Enzyme Structure and Class-Specific Variations; 3 Structural Biology: Molecular Basis of Substrate Recognition; 4 Computational Studies; 5 Catalytic Mechanism; 6 In Vitro Transpeptidation Activity; 7 Conclusions and Future Directions 
650 0 |a Enzymology. 
650 0 |a Enzymes  |x Structure. 
650 7 |a SCIENCE / Life Sciences / Biochemistry  |2 bisacsh 
650 7 |a Enzymes  |x Structure.  |2 fast  |0 (OCoLC)fst00913626 
650 7 |a Enzymology.  |2 fast  |0 (OCoLC)fst00913635 
655 4 |a Electronic books. 
700 1 |a Karabencheva-Christova, Tatyana,  |e editor. 
776 0 8 |c Original  |z 9780128118764  |z 0128118768  |w (OCoLC)974699267 
830 0 |a Advances in protein chemistry and structural biology ;  |v v. 109. 
856 4 0 |u https://www.sciencedirect.com/science/bookseries/18761623/109  |z Full Text via HEAL-Link